dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04381
Location and strand information: 1772925 - 1774883 (+)
Family: 3.A.3.6.9
Protein type: TC
Protein description: Zinc-transporting ATPase

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04382
Location and strand information: 1774958 - 1775077 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04383
Location and strand information: 1775244 - 1777064 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04384
Location and strand information: 1777039 - 1778640 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04385
Location and strand information: 1778705 - 1779619 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04386
Location and strand information: 1779626 - 1780465 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04387
Location and strand information: 1780611 - 1781963 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04388
Location and strand information: 1782071 - 1783723 (+)
Family: GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6783
Protein molecular weight: 62017.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC21
Gene ID: MGYG000002407_04389
Location and strand information: 1783748 - 1784641 (+)
Family: GH43_17|GH43
Protein type: CAZyme
Protein description: Intracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 4.8737
Protein molecular weight: 33774.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002407_04381	Zinc-transporting ATPase	TC	1772925	1774883	+	3.A.3.6.9
MGYG000002407_04382	hypothetical protein	null	1774958	1775077	-	No domain
MGYG000002407_04383	hypothetical protein	TC	1775244	1777064	+	8.A.59.2.1
MGYG000002407_04384	HTH-type transcriptional activator RhaR	TF	1777039	1778640	+	HTH_AraC+HTH_AraC
MGYG000002407_04385	Lactose transport system permease protein LacF	TC	1778705	1779619	+	3.A.1.1.11
MGYG000002407_04386	L-arabinose transport system permease protein AraQ	TC	1779626	1780465	+	3.A.1.1.11
MGYG000002407_04387	Putative ABC transporter substrate-binding protein YesO	STP	1780611	1781963	+	SBP_bac_1
MGYG000002407_04388	hypothetical protein	CAZyme	1782071	1783723	+	GH0
MGYG000002407_04389	Intracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	1783748	1784641	+	GH43_17\| GH43
Protein ID	Protein Name	Type	Start	End	Strand	Signature